Active projects

Tumor budding with graph neural networks

Spatial-omic and single-cell 3D image analysis

Characterizing the phenotypic landscape of tumor buds

Predict patient outcomes using self-supervision

Epithelial cells classification with graph neural networks

Investigating H&E biomarker heterogeneity in CRC

Tumor topology to predict outcome after treatment

Streamlining AI algorithms on remote HPC infrastructure

CDX2's role in colorectal cancer

AI in IBD - Assessing Histological Disease Activity

Completed projects

Computer-assisted CRC lymph node metastases detection

Decoding tumor deposits in colorectal cancer

Morphological profiling of lymph node metastases

Spatial transcriptomics for colorectal cancer

Morpho-molecular spatial profiling of colorectal cancer and the tumor budding niche

Sergios Project goes here

Generative AI for de novo peptide design

3D characterization of colorectal cancer using LSFM

AI-assisted N-staging across cancer types

Investigating CAF-Driven Desmoplasia in CRC